CDS

Accession Number TCMCG006C49125
gbkey CDS
Protein Id XP_013732933.1
Location complement(join(43043..43444,43531..43626,43709..43990,44072..44131,44305..44568))
Gene LOC106436517
GeneID 106436517
Organism Brassica napus

Protein

Length 367aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013877479.2
Definition glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category C
Description glycerophosphodiester phosphodiesterase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R01030        [VIEW IN KEGG]
R01470        [VIEW IN KEGG]
KEGG_rclass RC00017        [VIEW IN KEGG]
RC00425        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18696        [VIEW IN KEGG]
EC 3.1.4.46        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00564        [VIEW IN KEGG]
map00564        [VIEW IN KEGG]
GOs GO:0000287        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006650        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0008081        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008889        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009395        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0030002        [VIEW IN EMBL-EBI]
GO:0030320        [VIEW IN EMBL-EBI]
GO:0030643        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046434        [VIEW IN EMBL-EBI]
GO:0046475        [VIEW IN EMBL-EBI]
GO:0046486        [VIEW IN EMBL-EBI]
GO:0046503        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0047389        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0055062        [VIEW IN EMBL-EBI]
GO:0055081        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0055083        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072501        [VIEW IN EMBL-EBI]
GO:0072502        [VIEW IN EMBL-EBI]
GO:0072505        [VIEW IN EMBL-EBI]
GO:0072506        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCTGAAAGCAATTCATGTAACAGAAGTGCCTAGCCTCGACAACTTCCCCGAGAATCCCTCCCTCTGCGCTTCTCGTTTCTCGCCTGGTGGTCTAAGCTCCTTCAAGATCCCAAAGTTTCTGGTTGTGGGACATAGAGGTCACGGCATGAACATGTTGCAGTCTACGGATCCAAGATTCTCTGCCTTCAAGGAAAACTCCATCCTCTCCTTCAATGCCGCTTCTAAACTCCCTCTCGACTTTATCGAATTCGATGTTCAGGTCACCAGAGATGGCTGCCCAGTCATTTTCCACGACGACTTCATCTACTCTGAAGATAACGGAGTGGTCTACGAGAAGAGGGTCACGGAGGTTAGCTCGTCCGAGTTCATGTCCTACGGGAAACAGAGGGAAACAGAGAAGAGCGGGAAGCCATTGCTGAGGAAGACGAAGGAAGGAAAGATCCTCAAGTGGTGCGTCCAACAAGACGACTCTCTCTGTACTCTCCAGGAGGCTTTTGAGAAAGTTGAGCCCAAGCTGGGTTTCAACATCGAGCTCAAGCTTGACGACAACCTTGTCTATTCCTCCGACCACCTCTCCCGTCTTCTCCTCCCGATCTTGCAGGTGGTGTGTGATTATGGAAAAGACAGGCCCATCATCTTCTCCAGCTTTCACCCTGATGCTGCCCTCCTCGCCAGGAAGCTGCAGAGCAACTACCCTGTATTCTTCCTGACAAACGGAGGAACACAGATGTACTACGACGTGAGAAGGAACTCACTGGAGGAAGCAATCAAAGTATGTGTAGAGGGAGGCCTCCAAGGGATTGTCTCGGAGGTGAAGGGTGTTTTCAGGAACCCAGCTGCGGTCAACAGGATAAAAGAGTCCAAACTCTCTCTGATGACATACGGGAAGCTCAACAACGTAGCCGAGGCTGTGTATATGCAGCATTTGATGGGAATAGAAGGAGTCATAGTGGATCATGTGGAAGAGATGACAGAAGCTGTGAGGGAGATGATGAAGCCATCCAATAGAGATGCTCATGATACTAAGCCAAAGCCAAACTTCTCTGAGAGAGAGCTCTCCTTTCTTCTCAAGCTCATTCCTGAGTTGATACAACACTGA
Protein:  
MSLKAIHVTEVPSLDNFPENPSLCASRFSPGGLSSFKIPKFLVVGHRGHGMNMLQSTDPRFSAFKENSILSFNAASKLPLDFIEFDVQVTRDGCPVIFHDDFIYSEDNGVVYEKRVTEVSSSEFMSYGKQRETEKSGKPLLRKTKEGKILKWCVQQDDSLCTLQEAFEKVEPKLGFNIELKLDDNLVYSSDHLSRLLLPILQVVCDYGKDRPIIFSSFHPDAALLARKLQSNYPVFFLTNGGTQMYYDVRRNSLEEAIKVCVEGGLQGIVSEVKGVFRNPAAVNRIKESKLSLMTYGKLNNVAEAVYMQHLMGIEGVIVDHVEEMTEAVREMMKPSNRDAHDTKPKPNFSERELSFLLKLIPELIQH